PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G066900.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 335aa    MW: 38353.4 Da    PI: 4.7508
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G066900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44e-11169212654
                        HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                         ++ErrRR+r+N++++ Lr+++P  +      K++  +iL  ++eY+k+L
  Aqcoe6G066900.2.p 169 LMAERRRRKRLNDRLSMLRSVVPRiS------KMDRTSILGDTIEYMKEL 212
                        589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.262163212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-15166228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.6E-9169212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.6E-12169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.35E-4170217No hitNo description
Gene3DG3DSA:4.10.280.106.2E-15170227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00171261323No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MELNEHGFLE ELLSLRRENW ETFPPTGMSD QFFSNGWSLD CFNENQSGIL PNLSLESGFD  60
VSIEPSFNCS MNDVYYPYES NGLLVPEMNS SSYHQKRDTT HTQDDIPLLM EDEEHSLLNN  120
DFHSFEEKET SCKVESIQAT ESTPVFNMGL CNEKKNKIKK LDGQPSKNLM AERRRRKRLN  180
DRLSMLRSVV PRISKMDRTS ILGDTIEYMK ELLEKIKNLQ GDIEEESNHL NFKGVLKDLK  240
ENELVMRNTP KFDVEKKNMN TRIEICCTSK PGLLMSTVNT LEALGLEIQQ CVISCFNDFA  300
MQASCSEELE KRGMSCEEIK QALFKNAGYG GRCI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171178ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275502.11e-151PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL12e-78BH093_ARATH; Transcription factor bHLH93
TrEMBLF6GZL01e-136F6GZL0_VITVI; Putative uncharacterized protein
TrEMBLJ9UVQ21e-136J9UVQ2_VITVI; Transcription factor bHLH
STRINGVIT_18s0001g08040.t011e-135(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-79beta HLH protein 93